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Publications

Scientific articles (Peer-reviewed)
  • In press. Ali HA, Coulson T, Clegg SM, and CS Quilodrán. The effect of divergent and parallel selection on the genomic landscape of divergence. Molecular Ecology.
  • In press. Quilodrán CS, Currat M and JI Montoya-Burgos. Benchmarking the Mantel test and derived methods for testing association between distance matrices. Molecular Ecology Resources.
  • In press. Di Santo L, Quilodrán CS and Currat M. Temporal variation in introgressed segments' length statistics sheds light on past admixture pulses. Molecular Biology and Evolution.
  • 2023. Quilodrán CS, Rio J, Tsoupas A, and M Currat. Past human expansions shaped the spatial pattern of Neanderthal ancestry. Science Advances.
  • 2023. Fuentes-Allende N, Quilodrán CS, Jofré A, and B González. Behavioral responses of vicuñas to human activities at priority feeding sites associated with roads in the highland desert of northern Chile. International journal of agriculture and natural resources.
  • 2023. Nussberger B, Barbosa S, Beaumont M, Currat M, Devillard S, Heurich M, Howard-McCombe J, Mattucci F, Nowak C, Quilodrán CS, Senn H, Alves PC and EUROWILDCAT Consortium. A common statement on anthropogenic hybridization of the European wildcat (Felis silvestris). Frontiers in Ecology and Evolution 11:1156387.
  • 2023. Sandvig EM, Quilodrán CS, Altamirano TA, Aguirre F, Barroso O, Rivero de Aguilar J, Schaub S, Kéry M, Vásquez RA, and R Rozzi. Survival rates in the world's southernmost forest bird community. Ecology and Evolution 13(6):e10143.
  • 2022. Rozzi R, Quilodrán CS, Botero-Delgadillo E, Crego RD, Napolitano C, Barroso O, MacKenzie R, Torres-Mura JC, Bravo C, Ippi S, Quirici V, Rivero de Aguilar J, Suazo CG, Goffinet B, Kempenaers B, Poulin E, and RA Vásquez. The Subantarctic Rayadito (Aphrastura subantarctica), a new bird species on the southernmost islands of the Americas. Scientific Reports.
  • 2022. Rozzi R, Quilodrán CS, Botero-Delgadillo E, Crego RD, Napolitano C, Barroso O, Torres-Mura JC, and RA Vásquez. 2023. The Subantarctic Rayadito: Availability of the binomen Aphrastura subantarctica (Passeriformes, Furnariidae). Boletín Museo Nacional de Historia Natural.
  • 2022. Quilodrán CS, Sandvig EM, Aguirre F, Rivero de Aguilar J, Barroso O, Vásquez RA, and R Rozzi. Effects of the extreme rainfall gradient in the Cape Horn Biosphere Reserve on forest bird richness. Biodiversity and Conservation.
  • 2022. Smith WJ, Quilodrán CS, Jezierski MT, Sendell-Price AT, and S Clegg. The wild ancestors of domestic animals as a neglected and threatened component of biodiversity. Conservation Biology.
  • 2021. McGaughran A, Mori E, and CS Quilodrán. The Genomics of Biological Invasion. Frontiers in Ecology and Evolution.
  • 2021. Rio J, Quilodrán CS, and M Currat. Spatially explicit paleogenomic simulations support cohabitation with limited admixture between Bronze Age Central European populations. Communications Biology 4, 1163.
  • 2021. Quilodrán CS, M Currat, and JI Montoya-Burgos. Air temperature influences early Covid-19 outbreak as indicated by worldwide mortality. Science of the Total Environment 792:148312.
  • 2020. Quilodrán CS, Ruegg KC, Sendell-Price AT, Anderson EC, Coulson T and SM Clegg. The many population genetic and demographic routes to islands of genomic divergence. Methods in Ecology and Evolution 11(1):6-21.
  • 2020. Sendell-Price AT, Ruegg KC, Anderson EC, Quilodrán CS, Van Doren BM, Le Underwood V, Coulson T and SM Clegg. The genomic landscape of divergence across the speciation continuum in island-colonising silvereyes (Zosterops lateralis). G3: Genes, Genomes, Genetics 10(9):3147-3163.
  • 2020. Quilodrán CS, Tsoupas A, and M Currat. The spatial signature of introgression after a biological invasion with hybridization. Frontiers in Ecology and Evolution 8:569620.
  • 2020. Quilodrán CS, Montoya-Burgos JI, and M Currat. Harmonizing hybridization dissonance in conservation. Communications Biology 3(1):1-10.
  • 2020. Quilodrán CS, Nussberger B, DW Macdonald, Montoya-Burgos JI, and M Currat. Projecting introgression from domestic cats into European wildcat in the Swiss Jura. Evolutionary Applications 13(8):2101-2112.
  • 2020. Sandvig E, Quilodrán CS, Aguirre F, Rivero de Aguilar J, Barroso O, Vásquez RA and R Rozzi. Distribution patterns of forest birds in the Cape Horn Biosphere Reserve: a scientific baseline for planning sustainable Birdwatching. Anales Instituto Patagonia 48(3):169-183.
  • 2019. Currat M, Arenas M, Quilodrán CS, Excoffier L and N Ray N. SPLATCHE3: simulation of serial genetic data under spatially explicit evolutionary scenarios including long-distance dispersal. Bioinformatics 35(21):4480–4483.
  • 2019. Quilodrán CS, Nussberger B, Montoya-Burgos JI and M Currat. Hybridization and introgression during density-dependent range expansion: European wildcats as a case study. Evolution 73(4):750-761.
  • 2018. Quilodrán CS, Currat M and JI Montoya-Burgos. Effect of hybridization with genome exclusion on extinction risk. Conservation Biology 32(5):1139-1149.
  • 2018. Quilodrán CS, Austerlitz F, Montoya-Burgos JI and M Currat. Cryptic Biological Invasions: a General Model of Hybridization. Scientific Reports 8:2414.
  • 2018. Nussberger B, Currat M, Quilodrán CS, Ponta N and LF Keller. Range expansion as an explanation for introgression in European wildcats. Biological Conservation 218:49-56.
  • 2017. Jardim de Queiroz L, Torrente Vilara G, Quilodrán CS, Doria C and JI Montoya-Burgos. Multifactorial genetic divergence processes drive the onset of speciation in an Amazonian fish. Plos one, 12(12), e0189349.
  • 2015. Quilodrán CS, Montoya-Burgos JI and M Currat. Modelling interspecific hybridization with genome exclusion to identify conservation actions: the case of native and invasive Pelophylax waterfrogs. Evolutionary Applications 8:199-210.
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  • 2014. Quilodrán CS, Currat M and JI Montoya-Burgos. General Model of Distant Hybridization Reveals the Conditions for Extinction in Atlantic Salmon and Brown Trout. Plos One 9:e101736.
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  • 2014. Quilodrán CS, Estades CF and RA Vásquez. Conspecific effect on habitat selection of a territorial cavitynesting bird. The Wilson Journal of Ornithology 126(3):534-543.
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  • 2013. Quilodrán CS, Pernollet CA, Chavéz MA and CF Estades. Nest-site selection and success of Red Shoveler (Anas platalea) in a wetland of Central Chile. Waterbirds 36(1):102-107.
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  • 2012. Quilodrán CS, Vásquez RA and CF Estades. Nesting of the Thorn-Tailed Rayadito (Aphrastura spinicauda) in a pine plantation in Southcentral Chile. The Wilson Journal of Ornithology 124(4):737-742.
Book chapters (Peer-reviewed)
  • 2021. Currat M, Quilodrán CS and L Excoffier. Simulations of human dispersal and genetic diversity. in S. Naruya, editor. Evolution of the Human Genome II: Human Evolution Viewed from Genomes. Springer, Tokyo.
  • 2014. Excoffier L, Quilodrán CS and M Currat. Models of hybridization during range expansions and their application to recent human evolution. Pages 122-137 in A. Derevianko and M. Shunkov, editors. Cultural Developments in the Eurasian Paleolithic and the Origin of Anatomically Modern Humans. Department of the Institute of Archaeology and Ethnography SB RAS, Novosibirsk, Russia.

Computer programs
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Thesis
Conferences